DBD
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Alternative splicingBlastCandida spDEFGHIJKLMNOPQRSTUVWXYZ
 
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Keywords Database Description Website
O-GLYCBASE The database is non-redundant in the sense that it contains no identical sequences, unless there is conflicting glycosylation data. http:// www.cbs.dtu.dk/databases/OGLYCBASE/
Oligo Pre-Designed Oligonucleotide Database http://www.ctaalliance.org/MCBI/OligoDatabase.html
Oligonucleotide Database http://www.oligo.net/oligo_screens.htm
Encephalitozoon cuniculi Oligonucleotide Database http://fc.isima.fr/~rimour/oligo/
VirOligo (Virus Oligonucleotide) http://viroligo.okstate.edu/
Maize Oligonucleotide Array Project http://www.maizearray.org/maize_search_basic.shtml
Rice Oligonucleotide Array Project http://www.ricearray.org/rice_search_basic.shtml
DOLGANOV LAB - Oligo Database http://www.airwaydiseasegenomics.org/
i-Genome: A database to summarize oligonucleotide data in genomes http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=526275
AOBase-Antisense oligonucleotide selection and design http://www.bioit.org.cn/ao/aobase
OMIM Online Mendelian Inheritance in Man (OMIM) http://www.ncbi.nlm.nih.gov/omim/
Online Online transaction processing (OLTP) database system http://dssresources.com/glossary/239.php
Ontology Gene Ontology Database http://www.geneontology.org/
Operon DataBase http://odb.kuicr.kyoto-u.ac.jp/
Uber-Operon Database http://csbl.bmb.uga.edu/uber/index.php
ORF (Open Reading Frame) Virus Database WebORF http://www.biochem.ucl.ac.uk/bsm/virus_database/weborf.html
AlterORF - Database of alternate open reading frames http://www.cienciavida.cl/alterorf/
Organelles Complete organelle genome database http://megasun.bch.umontreal.ca/ogmp/projects/other/all_list.html
The Plant Organelles Database is a specialized database project dedicated for plant organelle research. http://podb.nibb.ac.jp/Organellome/
A database of organelle proteins, and subcellular structures / complexes http://organelledb.lsi.umich.edu/
GOBASE: the organelle genome database http://megasun.bch.umontreal.ca/gobase/
Organelle map database http://proteome.biochem.mpg.de/ormd/
Database http://www.nal.usda.gov/pgdic/Probe/v6n1/organ.html
Functional Genomics of Organellar Introns Database (FUGOID) http://web.austin.utexas.edu/fugoid/introndata/main.htm
Organic CSD (Cambridge Structural Database): Crystal structure information for organic and metal organic compounds. http://www.ccdc.cam.ac.uk/prods/csd/csd.html
Organism GMOD is the Generic Model Organism Database http://www.gmod.org/
Merine Database http://www.mbl.edu/marine_org/marine_org.php?func=browse&myID=D1
Organism Database http://saf.bio.caltech.edu/model_org.html
Origin OriDB - DNA Replication Origin Database http://www.oridb.org/
Ortholog InParanoid: Eukaryotic Ortholog Groups http://inparanoid.sbc.su.se/
TreeFam (Tree families database) is a database of phylogenetic trees of animal genes. http://www.treefam.org/
ORTHOLOG http://zfin.org/zf_info/dbase/PAPERS/ZFIN_DataModel/sectionii_6.html
EGO - Eukaryotic Gene Orthologs:Orthologous DNA sequences in the TIGR gene indices http://compbio.dfci.harvard.edu/tgi/ego/
Roundup  is a large-scale database of orthology covering over 220 publicly available genomes. https://rodeo.med.harvard.edu/tools/roundup/
Non-supervised Orthologous Groups :eggNOG

http://eggnog.embl.de/
Experimentally verified orthologous transcription factor binding sites http://genome.imim.es/datasets/abs2005/
COG - Clusters of Orthologous Groups of proteins Protein families from complete microbial genomes http://www.ncbi.nlm.nih.gov/COG
DoOP - Databases of Orthologous Promoters http://doop.abc.hu/

 

 

Database Submission Form:Submit Databases to DBD in the following format. After verification it will be posted in DBD in 2 or 3 weeks. For further queries contact rrskiran@msrit.edu.

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DBD: Database of Biological Database team are R.R. Siva Kiran, MVN Setty, Department of Biotechnology, MS Ramaiah Institute of Technology, MSR Nagar, Bangalore, India and G. Hanumantha Rao, Center for Biotechnology, Department of Chemical Engineering, Andhra University, Visakhapatnam-530003, India. DBD consists of 1200 Database entries covering wide range of databases useful for biological researchers.

Encouragements List (or list of database contributors)

Andhra University
All Rights Reserved, Maintained by R.R. Siva Kiran, Department of Biotechnology, MS Ramaiah Institute of Technology, Bangalore, India
Last update: 30-July-2008